| 1 | - |  | KOEFC1. FC Köln | | 25 | 51 | 16 | 3 | 6 | 64:31 | +33 |
| 2 | - |  | HSVHamburger SVHamburger SV | | 26 | 50 | 15 | 5 | 6 | 38:29 | +9 |
| 3 | - |  | FCUUnion Berlin1. FC Union Berlin | | 26 | 47 | 12 | 11 | 3 | 42:23 | +19 |
| 4 | - |  | STPFC St. PauliFC St. Pauli | | 26 | 43 | 13 | 4 | 9 | 38:40 | -2 |
| 5 | - |  | KIEHolstein KielHolstein Kiel | | 26 | 42 | 11 | 9 | 6 | 51:37 | +14 |
| 6 | - |  | FCH1. FC Heidenheim 18461. FC Heidenheim 1846 | | 26 | 42 | 11 | 9 | 6 | 40:32 | +8 |
| 7 | - |  | SCPSCPSC Paderborn 07 | | 26 | 41 | 11 | 8 | 7 | 58:40 | +18 |
| 8 | - |  | REGJahn RegensburgSSV Jahn Regensburg | | 26 | 37 | 9 | 10 | 7 | 38:38 | 0 |
| 9 | - |  | BOCVfL BochumVfL Bochum 1848 | | 26 | 34 | 9 | 7 | 10 | 37:39 | -2 |
| 10 | |  | DSCArminia BielefeldDSC Arminia Bielefeld | | 26 | 34 | 9 | 7 | 10 | 38:41 | -3 |
| 11 | |  | AUEErzgebirge AueFC Erzgebirge Aue | | 26 | 32 | 9 | 5 | 12 | 33:35 | -2 |
| 12 | - |  | D98Darmstadt 98SV Darmstadt 98 | | 26 | 32 | 9 | 5 | 12 | 37:45 | -8 |
| 13 | - |  | SGFSpVgg Greuther FürthSpVgg Greuther Fürth | | 25 | 32 | 8 | 8 | 9 | 26:41 | -15 |
| 14 | - |  | SGDDynamo DresdenSG Dynamo Dresden | | 25 | 28 | 7 | 7 | 11 | 29:38 | -9 |
| 15 | |  | SVSSV SandhausenSV Sandhausen | | 26 | 23 | 5 | 8 | 13 | 29:38 | -9 |
| 16 | |  | FCMFC Magdeburg1. FC Magdeburg | | 26 | 23 | 4 | 11 | 11 | 28:41 | -13 |
| 17 | |  | MSVMSV DuisburgMSV Duisburg | | 25 | 21 | 5 | 6 | 14 | 24:42 | -18 |
| 18 | - |  | FCIFC Ingolstadt 04FC Ingolstadt 04 | | 26 | 19 | 4 | 7 | 15 | 25:45 | -20 |
